[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
5604	7959251	NM_002562	P2RX7		purinergic receptor P2X, ligand-gated ion channel, 7

Fetching correlation data, please wait...
Getting list of correlations for id 5604.
Getting list of p-values for id 5604.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.109 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	7959251	8076403	NM_000262	NAGA	0.779037	1.309862e-22	2.269598e-18	2.269598e-18
2	7959251	8145470	NM_001386	DPYSL2	0.742886	1.167098e-19	2.022230e-15	1.011115e-15
3	7959251	8074237	NM_017424	CECR1	0.726458	1.777847e-18	3.080475e-14	1.026825e-14
4	7959251	8076690	NM_001009880	C22orf9	0.704358	5.157195e-17	8.935871e-13	2.233968e-13
5	7959251	8115076	NM_005211	CSF1R	0.686981	5.903297e-16	1.022864e-11	2.045728e-12
6	7959251	8011826	AY358809	C17orf87	0.682220	1.117929e-15	1.937035e-11	3.228391e-12
7	7959251	8076998	NM_012401	PLXNB2	0.677543	2.069128e-15	3.585177e-11	5.121682e-12
8	7959251	7935058	NM_013451	MYOF	0.672320	4.060762e-15	7.036082e-11	8.795103e-12
9	7959251	7918323	NM_002959	SORT1	0.672305	4.068601e-15	7.049664e-11	7.832960e-12
10	7959251	7981824	NM_014608	CYFIP1	0.670701	4.991482e-15	8.648740e-11	8.648740e-12
11	7959251	7927186	NM_032023	RASSF4	0.663723	1.196630e-14	2.073400e-10	1.884909e-11
12	7959251	8136849	NM_001143679	GSTK1	0.662683	1.360446e-14	2.357245e-10	1.964371e-11
13	7959251	7906564	NM_003768	PEA15	0.661816	1.513434e-14	2.622328e-10	2.017175e-11
14	7959251	8004497	NM_001416	EIF4A1	0.656334	2.945725e-14	5.104057e-10	3.645755e-11
15	7959251	8006214	NM_018404	ADAP2	0.654002	3.894183e-14	6.747450e-10	4.498300e-11
16	7959251	8021727	NM_018235	CNDP2	0.653683	4.044933e-14	7.008656e-10	4.380410e-11
17	7959251	7950473	NM_004041	ARRB1	0.646476	9.430188e-14	1.633969e-9	9.611580e-11
18	7959251	8040908	NM_014748	SNX17	0.635001	3.467263e-13	6.007726e-9	3.337626e-10
19	7959251	7934196	NM_002778	PSAP	0.633668	4.019050e-13	6.963807e-9	3.665162e-10
20	7959251	8045182	NM_014369	PTPN18	0.629407	6.414586e-13	1.111455e-8	5.557276e-10
21	7959251	8086028	NM_000404	GLB1	0.628255	7.269889e-13	1.259654e-8	5.998350e-10
22	7959251	7960874	NM_004054	C3AR1	0.628085	7.405034e-13	1.283070e-8	5.832137e-10
23	7959251	8013696	NM_014680	KIAA0100	0.626224	9.053854e-13	1.568761e-8	6.820701e-10
24	7959251	8030007	NM_001425	EMP3	0.625026	1.029724e-12	1.784203e-8	7.434179e-10
25	7959251	8165011	NM_002003	FCN1	0.624395	1.101593e-12	1.908730e-8	7.634919e-10
26	7959251	7994826	NM_002209	ITGAL	0.622243	1.385429e-12	2.400533e-8	9.232819e-10
27	7959251	7936529	NM_001127211	KIAA1598	0.620485	1.668585e-12	2.891157e-8	1.070799e-9
28	7959251	7899703	NM_175852	TXLNA	0.619597	1.832150e-12	3.174567e-8	1.133774e-9
29	7959251	7915504	NM_022821	ELOVL1	0.618882	1.975078e-12	3.422218e-8	1.180075e-9
30	7959251	8072687	NM_006739	MCM5	0.618554	2.044082e-12	3.541781e-8	1.180594e-9
31	7959251	8161114	NM_020944	GBA2	0.617386	2.309446e-12	4.001577e-8	1.290831e-9
32	7959251	8163383	NM_022486	SUSD1	0.613935	3.303067e-12	5.723224e-8	1.788507e-9
33	7959251	7973458	NM_198083	DHRS4L2	0.613511	3.450187e-12	5.978139e-8	1.811557e-9
34	7959251	8066716	NM_133171	ELMO2	0.612443	3.850405e-12	6.671597e-8	1.962234e-9
35	7959251	7913256	NM_005216	DDOST	0.611594	4.199776e-12	7.276952e-8	2.079129e-9
36	7959251	8077550	NM_001077525	MTMR14	0.611379	4.292811e-12	7.438154e-8	2.066154e-9
37	7959251	7999233	NM_032569	GLYR1	0.610909	4.503721e-12	7.803598e-8	2.109080e-9
38	7959251	8003180	NM_001145548	ZDHHC7	0.610576	4.659226e-12	8.073040e-8	2.124484e-9
39	7959251	7909967	NM_001748	CAPN2	0.609785	5.049368e-12	8.749041e-8	2.243344e-9
40	7959251	7928705	NM_030927	TSPAN14	0.609566	5.163330e-12	8.946502e-8	2.236626e-9
41	7959251	8084439	NM_182917	EIF4G1	0.608874	5.538029e-12	9.595743e-8	2.340425e-9
42	7959251	7990757	NM_004390	CTSH	0.607834	6.151708e-12	1.065906e-7	2.537873e-9
43	7959251	8072015	NM_005160	ADRBK2	0.607468	6.383245e-12	1.106025e-7	2.572151e-9
44	7959251	8101158	NM_005506	SCARB2	0.607326	6.475052e-12	1.121932e-7	2.549846e-9
45	7959251	8149638	NM_003974	DOK2	0.607017	6.679330e-12	1.157327e-7	2.571839e-9
46	7959251	7956301	NM_002332	LRP1	0.606101	7.323330e-12	1.268913e-7	2.758508e-9
47	7959251	7990151	NM_182470	PKM2	0.605271	7.957379e-12	1.378775e-7	2.933564e-9
48	7959251	7941936	NM_000852	GSTP1	0.603144	9.835176e-12	1.704141e-7	3.550294e-9
49	7959251	7963698	NM_001130059	ATF7	0.603096	9.881708e-12	1.712203e-7	3.494293e-9
50	7959251	7977786	NM_003982	SLC7A7	0.601695	1.135122e-11	1.966826e-7	3.933652e-9

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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