[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
4510 8141380 NM_032924 ZNF3 link to infopage zinc finger protein 3

Fetching correlation data, please wait...
Getting list of correlations for id 4510.
Getting list of p-values for id 4510.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.125 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8141380 8018600 NM_014230 SRP68 link to infopage 0.740170 1.856706e-19 3.217114e-15 3.217114e-15
2 8141380 7929116 NM_006413 RPP30 link to infopage 0.716337 8.647539e-18 1.498359e-13 7.491796e-14
3 8141380 8130505 NM_003379 EZR link to infopage 0.709433 2.446824e-17 4.239611e-13 1.413204e-13
4 8141380 7903619 NM_006513 SARS link to infopage 0.704800 4.835944e-17 8.379240e-13 2.094810e-13
5 8141380 8010949 NM_016080 GLOD4 link to infopage 0.703516 5.826837e-17 1.009616e-12 2.019232e-13
6 8141380 8007715 NM_021079 NMT1 link to infopage 0.694079 2.226845e-16 3.858454e-12 6.430756e-13
7 8141380 8114396 NM_004661 CDC23 link to infopage 0.691702 3.096170e-16 5.364733e-12 7.663904e-13
8 8141380 8117646 NM_006298 ZNF192 link to infopage 0.685415 7.292566e-16 1.263583e-11 1.579479e-12
9 8141380 8023165 NM_032124 HDHD2 link to infopage 0.683544 9.371630e-16 1.623822e-11 1.804247e-12
10 8141380 8071547 NM_198157 UBE2L3 link to infopage 0.681139 1.290173e-15 2.235482e-11 2.235482e-12
11 8141380 8145586 NM_018091 ELP3 link to infopage 0.674108 3.228815e-15 5.594567e-11 5.085970e-12
12 8141380 8042207 NM_152516 COMMD1 link to infopage 0.672373 4.033586e-15 6.988995e-11 5.824163e-12
13 8141380 7920317 NM_004515 ILF2 link to infopage 0.667479 7.496037e-15 1.298838e-10 9.991065e-12
14 8141380 7941511 NM_006842 SF3B2 link to infopage 0.666593 8.375198e-15 1.451171e-10 1.036550e-11
15 8141380 7899504 NM_006582 GMEB1 link to infopage 0.666265 8.725468e-15 1.511862e-10 1.007908e-11
16 8141380 8109368 NM_005754 G3BP1 link to infopage 0.663738 1.194331e-14 2.069418e-10 1.293386e-11
17 8141380 8011212 NM_003001 SDHC link to infopage 0.663189 1.278153e-14 2.214656e-10 1.302739e-11
18 8141380 8048340 NM_005444 RQCD1 link to infopage 0.662583 1.377280e-14 2.386413e-10 1.325785e-11
19 8141380 8110803 NM_030782 CLPTM1L link to infopage 0.662576 1.378480e-14 2.388492e-10 1.257101e-11
20 8141380 7941214 NM_002689 POLA2 link to infopage 0.662342 1.418738e-14 2.458247e-10 1.229123e-11
21 8141380 8006715 NM_001488 TADA2A link to infopage 0.661171 1.637960e-14 2.838093e-10 1.351473e-11
22 8141380 7953351 NM_014865 NCAPD2 link to infopage 0.659544 1.997853e-14 3.461679e-10 1.573491e-11
23 8141380 8171516 NM_002893 RBBP7 link to infopage 0.659150 2.095798e-14 3.631389e-10 1.578865e-11
24 8141380 8034806 NM_005804 DDX39 link to infopage 0.658923 2.154478e-14 3.733064e-10 1.555443e-11
25 8141380 8050608 BC017473 C2orf43 link to infopage 0.658842 2.175915e-14 3.770209e-10 1.508083e-11
26 8141380 7924923 NM_018230 NUP133 link to infopage 0.657299 2.622476e-14 4.543964e-10 1.747679e-11
27 8141380 8080438 NM_014041 SPCS1 link to infopage 0.657269 2.631854e-14 4.560214e-10 1.688968e-11
28 8141380 8145782 NM_032509 MAK16 link to infopage 0.656597 2.854121e-14 4.945336e-10 1.766191e-11
29 8141380 8075585 NM_014306 C22orf28 link to infopage 0.655416 3.288648e-14 5.698241e-10 1.964911e-11
30 8141380 7981032 NM_020414 DDX24 link to infopage 0.655258 3.351489e-14 5.807126e-10 1.935709e-11
31 8141380 8162313 NM_013417 IARS link to infopage 0.655025 3.446192e-14 5.971217e-10 1.926199e-11
32 8141380 8127841 NM_015599 PGM3 link to infopage 0.654092 3.852581e-14 6.675366e-10 2.086052e-11
33 8141380 7929831 NM_017902 HIF1AN link to infopage 0.654008 3.891526e-14 6.742847e-10 2.043287e-11
34 8141380 7928369 NM_004922 SEC24C link to infopage 0.651541 5.214571e-14 9.035288e-10 2.657438e-11
35 8141380 8143781 NM_024711 GIMAP6 link to infopage 0.651204 5.426082e-14 9.401772e-10 2.686221e-11
36 8141380 7962811 NM_017822 C12orf41 link to infopage 0.650774 5.708118e-14 9.890455e-10 2.747349e-11
37 8141380 8090448 NM_003707 RUVBL1 link to infopage 0.650037 6.224829e-14 1.078576e-9 2.915071e-11
38 8141380 8006148 NM_004871 GOSR1 link to infopage 0.649404 6.704121e-14 1.161623e-9 3.056903e-11
39 8141380 7947694 NM_001008938 CKAP5 link to infopage 0.648859 7.145545e-14 1.238109e-9 3.174638e-11
40 8141380 7973414 NM_015514 NGDN link to infopage 0.647366 8.504449e-14 1.473566e-9 3.683915e-11
41 8141380 8151066 NM_018120 ARMC1 link to infopage 0.647241 8.629156e-14 1.495174e-9 3.646765e-11
42 8141380 8064581 NM_021826 FASTKD5 link to infopage 0.647176 8.694254e-14 1.506453e-9 3.586794e-11
43 8141380 7923712 NM_005057 RBBP5 link to infopage 0.646992 8.881904e-14 1.538968e-9 3.578994e-11
44 8141380 7903878 NM_022768 RBM15 link to infopage 0.646134 9.810452e-14 1.699857e-9 3.863311e-11
45 8141380 7914764 NM_007167 ZMYM6 link to infopage 0.645118 1.103294e-13 1.911677e-9 4.248172e-11
46 8141380 7981919 NM_022807 SNRPN link to infopage 0.644179 1.229240e-13 2.129903e-9 4.630225e-11
47 8141380 8020323 NM_003799 RNMT link to infopage 0.643719 1.295766e-13 2.245174e-9 4.776966e-11
48 8141380 8104166 NM_004168 SDHA link to infopage 0.643438 1.338219e-13 2.318732e-9 4.830692e-11
49 8141380 7928491 NM_012330 MYST4 link to infopage 0.643158 1.381789e-13 2.394225e-9 4.886174e-11
50 8141380 8152782 NM_014846 KIAA0196 link to infopage 0.642377 1.510930e-13 2.617988e-9 5.235976e-11

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!