[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
7124	8044804	NM_020548	DBI		diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)

Fetching correlation data, please wait...
Getting list of correlations for id 7124.
Getting list of p-values for id 7124.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.085 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	8044804	7954243	ENST00000449390		0.658231	2.343026e-14	4.059762e-10	4.059762e-10
2	8044804	7920244	NM_002964	S100A8	0.640834	1.800872e-13	3.120370e-9	1.560185e-9
3	8044804	7983360	NM_004048	B2M	0.615752	2.737428e-12	4.743142e-8	1.581047e-8
4	8044804	8082058	NM_005213	CSTA	0.601456	1.162206e-11	2.013755e-7	5.034387e-8
5	8044804	8179827	NM_001288	CLIC1	0.588680	3.988060e-11	6.910111e-7	1.382022e-7
6	8044804	8125059	NM_001288	CLIC1	0.588104	4.210607e-11	7.295719e-7	1.215953e-7
7	8044804	8178598	NM_001288	CLIC1	0.582453	7.134104e-11	1.236126e-6	1.765895e-7
8	8044804	7917906	NM_000971	RPL7	0.575636	1.329991e-10	2.304475e-6	2.880594e-7
9	8044804	8109222	NM_000971	RPL7	0.570173	2.168614e-10	3.757558e-6	4.175064e-7
10	8044804	8151376	NM_000971	RPL7	0.565294	3.330880e-10	5.771415e-6	5.771415e-7
11	8044804	8127629	NM_001865	COX7A2	0.561804	4.508175e-10	7.811315e-6	7.101195e-7
12	8044804	8012469	NM_000987	RPL26	0.558363	6.055531e-10	1.049242e-5	8.743682e-7
13	8044804	8040036	NM_001011	RPS7	0.556360	7.179079e-10	1.243919e-5	9.568607e-7
14	8044804	8050695	NM_016047	SF3B14	0.554451	8.434532e-10	1.461451e-5	1.043894e-6
15	8044804	8035829	NM_000995	RPL34	0.553250	9.329717e-10	1.616560e-5	1.077707e-6
16	8044804	8141222	NM_001006	RPS3A	0.552517	9.920616e-10	1.718945e-5	1.074341e-6
17	8044804	7946807	NM_021029	RPL36A	0.552302	1.010066e-9	1.750142e-5	1.029495e-6
18	8044804	7988031	NM_001006	RPS3A	0.550469	1.176710e-9	2.038885e-5	1.132714e-6
19	8044804	7955768	NM_002624	PFDN5	0.548694	1.363024e-9	2.361711e-5	1.243006e-6
20	8044804	8097782	NM_001006	RPS3A	0.547591	1.492786e-9	2.586550e-5	1.293275e-6
21	8044804	8036710	NM_004877	GMFG	0.546016	1.698670e-9	2.943285e-5	1.401564e-6
22	8044804	8138361	NM_021029	RPL36A	0.545268	1.805858e-9	3.129010e-5	1.422277e-6
23	8044804	8141050	NM_001006	RPS3A	0.543102	2.153844e-9	3.731966e-5	1.622594e-6
24	8044804	8106473	GENSCAN00000048464		0.540164	2.730106e-9	4.730455e-5	1.971023e-6
25	8044804	7898875	NM_000975	RPL11	0.539391	2.904584e-9	5.032773e-5	2.013109e-6
26	8044804	8168843	NM_021029	RPL36A	0.538430	3.136712e-9	5.434980e-5	2.090377e-6
27	8044804	8157454	NM_004888	ATP6V1G1	0.537581	3.356276e-9	5.815420e-5	2.153859e-6
28	8044804	7990965	NM_001021	RPS17	0.534046	4.440394e-9	7.693871e-5	2.747811e-6
29	8044804	7990916	NM_001021	RPS17	0.534046	4.440394e-9	7.693871e-5	2.653059e-6
30	8044804	7956211	NM_021019	MYL6	0.529014	6.577146e-9	1.139622e-4	3.798740e-6
31	8044804	7948455	NM_152852	MS4A6A	0.524953	8.989078e-9	1.557538e-4	5.024315e-6
32	8044804	8105432	NM_021104	RPL41	0.523265	1.022318e-8	1.771371e-4	5.535533e-6
33	8044804	7996313	NM_144673	CMTM2	0.520953	1.217893e-8	2.110242e-4	6.394674e-6
34	8044804	8075691	NM_021104	RPL41	0.518081	1.511035e-8	2.618171e-4	7.700503e-6
35	8044804	8061364	NM_021104	RPL41	0.517621	1.563916e-8	2.709798e-4	7.742280e-6
36	8044804	7935746	NM_001001342	BLOC1S2	0.516194	1.739293e-8	3.013674e-4	8.371316e-6
37	8044804	7985202	NM_002789	PSMA4	0.515114	1.884345e-8	3.265005e-4	8.824337e-6
38	8044804	7973936	NM_002791	PSMA6	0.513498	2.123178e-8	3.678830e-4	9.681131e-6
39	8044804	8043718	NM_001862	COX5B	0.511960	2.377031e-8	4.118682e-4	1.056072e-5
40	8044804	7968972	NM_005694	COX17	0.510911	2.566713e-8	4.447344e-4	1.111836e-5
41	8044804	8067288	NM_001001977	ATP5E	0.508399	3.081273e-8	5.338922e-4	1.302176e-5
42	8044804	8103222	GENSCAN00000040988		0.505260	3.863900e-8	6.694980e-4	1.594043e-5
43	8044804	8014066	NM_001003927	EVI2A	0.502648	4.656402e-8	8.068148e-4	1.876313e-5
44	8044804	8163185	NM_003329	TXN	0.501781	4.952086e-8	8.580480e-4	1.950109e-5
45	8044804	8070160	NM_001697	ATP5O	0.500921	5.263343e-8	9.119795e-4	2.026621e-5
46	8044804	8062326	NR_026562	C20orf24	0.500141	5.561430e-8	9.636290e-4	2.094846e-5
47	8044804	7920258	NM_014624	S100A6	0.499560	5.793922e-8	1.003913e-3	2.135985e-5
48	8044804	7905571	NM_002965	S100A9	0.499051	6.005292e-8	1.040537e-3	2.167785e-5
49	8044804	8127526	NM_001000	RPL39	0.496354	7.253506e-8	1.256815e-3	2.564928e-5
50	8044804	8067382	NM_002792	PSMA7	0.496173	7.345500e-8	1.272755e-3	2.545510e-5

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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