[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 16229.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
16229 8179827 NM_001288 CLIC1 link to infopage chloride intracellular channel 1

Fetching correlation data, please wait...
Getting list of correlations for id 16229.
Getting list of p-values for id 16229.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.102 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8179827 8125059 NM_001288 CLIC1 link to infopage 0.997021 1.903079e-116 3.297465e-112 3.297465e-112
2 8179827 8178598 NM_001288 CLIC1 link to infopage 0.995702 2.929858e-108 5.076566e-104 2.538283e-104
3 8179827 7956211 NM_021019 MYL6 link to infopage 0.881087 2.849098e-35 4.936631e-31 1.645544e-31
4 8179827 8036710 NM_004877 GMFG link to infopage 0.862460 3.131980e-32 5.426781e-28 1.356695e-28
5 8179827 7955768 NM_002624 PFDN5 link to infopage 0.840482 3.604642e-29 6.245764e-25 1.249153e-25
6 8179827 7905571 NM_002965 S100A9 link to infopage 0.828657 1.042707e-27 1.806699e-23 3.011164e-24
7 8179827 7920244 NM_002964 S100A8 link to infopage 0.822986 4.784712e-27 8.290470e-23 1.184353e-23
8 8179827 7983360 NM_004048 B2M link to infopage 0.806136 3.270214e-25 5.666300e-21 7.082875e-22
9 8179827 8072744 NM_013416 NCF4 link to infopage 0.800807 1.142507e-24 1.979622e-20 2.199580e-21
10 8179827 8169659 NM_004541 NDUFA1 link to infopage 0.790969 1.044100e-23 1.809111e-19 1.809111e-20
11 8179827 7963911 NM_001780 CD63 link to infopage 0.785531 3.373700e-23 5.845610e-19 5.314191e-20
12 8179827 7983512 NM_021199 SQRDL link to infopage 0.783669 5.000712e-23 8.664734e-19 7.220612e-20
13 8179827 8163185 NM_003329 TXN link to infopage 0.782147 6.880969e-23 1.192266e-18 9.171273e-20
14 8179827 8062326 NR_026562 C20orf24 link to infopage 0.775744 2.561068e-22 4.437563e-18 3.169688e-19
15 8179827 7920271 NM_019554 S100A4 link to infopage 0.774555 3.253916e-22 5.638060e-18 3.758707e-19
16 8179827 8018305 NM_016185 HN1 link to infopage 0.771073 6.503824e-22 1.126918e-17 7.043234e-19
17 8179827 8116020 NM_006816 LMAN2 link to infopage 0.770721 6.971193e-22 1.207899e-17 7.105286e-19
18 8179827 7994756 NM_002720 PPP4C link to infopage 0.766020 1.739160e-21 3.013443e-17 1.674135e-18
19 8179827 8134552 NM_005720 ARPC1B link to infopage 0.765782 1.820432e-21 3.154262e-17 1.660138e-18
20 8179827 7973660 NM_016576 GMPR2 link to infopage 0.760797 4.685100e-21 8.117873e-17 4.058936e-18
21 8179827 7916372 NM_004872 TMEM59 link to infopage 0.759258 6.244516e-21 1.081987e-16 5.152320e-18
22 8179827 8050695 NM_016047 SF3B14 link to infopage 0.755020 1.361940e-20 2.359834e-16 1.072652e-17
23 8179827 7900922 NM_004047 ATP6V0B link to infopage 0.754774 1.424430e-20 2.468110e-16 1.073091e-17
24 8179827 8101945 NM_002106 H2AFZ link to infopage 0.750294 3.190711e-20 5.528544e-16 2.303560e-17
25 8179827 7977657 NM_031314 HNRNPC link to infopage 0.750172 3.260744e-20 5.649892e-16 2.259957e-17
26 8179827 7998637 NM_016332 SEPX1 link to infopage 0.747498 5.232696e-20 9.066693e-16 3.487190e-17
27 8179827 8160587 NM_002493 NDUFB6 link to infopage 0.743380 1.071889e-19 1.857262e-15 6.878749e-17
28 8179827 8039796 NM_014453 CHMP2A link to infopage 0.743215 1.102751e-19 1.910736e-15 6.824057e-17
29 8179827 7955810 NM_018457 PRR13 link to infopage 0.743042 1.136067e-19 1.968462e-15 6.787801e-17
30 8179827 7978201 NM_006156 NEDD8 link to infopage 0.741969 1.365967e-19 2.366810e-15 7.889367e-17
31 8179827 8030374 NM_004107 FCGRT link to infopage 0.740618 1.720570e-19 2.981231e-15 9.616875e-17
32 8179827 7917472 NM_001514 GTF2B link to infopage 0.739965 1.922405e-19 3.330950e-15 1.040922e-16
33 8179827 8134589 NM_003910 BUD31 link to infopage 0.739153 2.206304e-19 3.822864e-15 1.158444e-16
34 8179827 8110022 NM_003945 ATP6V0E1 link to infopage 0.738540 2.446592e-19 4.239210e-15 1.246826e-16
35 8179827 7996313 NM_144673 CMTM2 link to infopage 0.738044 2.660101e-19 4.609157e-15 1.316902e-16
36 8179827 8036808 NM_018457 PRR13 link to infopage 0.736887 3.230184e-19 5.596939e-15 1.554705e-16
37 8179827 7994659 NM_017458 MVP link to infopage 0.735548 4.039106e-19 6.998559e-15 1.891502e-16
38 8179827 7930304 NM_004832 GSTO1 link to infopage 0.724520 2.420049e-18 4.193219e-14 1.103479e-15
39 8179827 8034631 NM_003765 STX10 link to infopage 0.724299 2.506000e-18 4.342147e-14 1.113371e-15
40 8179827 8043718 NM_001862 COX5B link to infopage 0.723791 2.715579e-18 4.705283e-14 1.176321e-15
41 8179827 8140151 NM_181471 RFC2 link to infopage 0.722758 3.195620e-18 5.537052e-14 1.350500e-15
42 8179827 7897404 NM_007262 PARK7 link to infopage 0.721950 3.627432e-18 6.285252e-14 1.496489e-15
43 8179827 8178419 NM_005803 FLOT1 link to infopage 0.721807 3.709809e-18 6.427985e-14 1.494880e-15
44 8179827 8124828 NM_005803 FLOT1 link to infopage 0.721807 3.709809e-18 6.427985e-14 1.460906e-15
45 8179827 8179688 NM_005803 FLOT1 link to infopage 0.721807 3.709809e-18 6.427985e-14 1.428441e-15
46 8179827 7967841 NM_001161344 CHFR link to infopage 0.720981 4.220664e-18 7.313144e-14 1.589814e-15
47 8179827 8082058 NM_005213 CSTA link to infopage 0.720443 4.589896e-18 7.952914e-14 1.692109e-15
48 8179827 7936871 NM_000274 OAT link to infopage 0.720135 4.814963e-18 8.342886e-14 1.738101e-15
49 8179827 8134740 NM_001008395 C7orf59 link to infopage 0.717813 6.895080e-18 1.194711e-13 2.438185e-15
50 8179827 8016980 hsa-mir-142 link to infopage 0.717022 7.786134e-18 1.349104e-13 2.698207e-15

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!