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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
17060 7905571 NM_002965 S100A9 link to infopage S100 calcium binding protein A9

Fetching correlation data, please wait...
Getting list of correlations for id 17060.
Getting list of p-values for id 17060.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.113 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7905571 8179827 NM_001288 CLIC1 link to infopage 0.828657 1.042707e-27 1.806699e-23 1.806699e-23
2 7905571 8036710 NM_004877 GMFG link to infopage 0.827568 1.403009e-27 2.430994e-23 1.215497e-23
3 7905571 7920271 NM_019554 S100A4 link to infopage 0.826310 1.971998e-27 3.416880e-23 1.138960e-23
4 7905571 8125059 NM_001288 CLIC1 link to infopage 0.825456 2.480783e-27 4.298452e-23 1.074613e-23
5 7905571 8178598 NM_001288 CLIC1 link to infopage 0.823912 3.745315e-27 6.489507e-23 1.297901e-23
6 7905571 7963911 NM_001780 CD63 link to infopage 0.813558 5.362699e-26 9.291948e-22 1.548658e-22
7 7905571 8039796 NM_014453 CHMP2A link to infopage 0.805758 3.578848e-25 6.201069e-21 8.858671e-22
8 7905571 7996313 NM_144673 CMTM2 link to infopage 0.800320 1.278365e-24 2.215023e-20 2.768779e-21
9 7905571 8073960 NM_001001852 PIM3 link to infopage 0.798869 1.783769e-24 3.090737e-20 3.434152e-21
10 7905571 8169659 NM_004541 NDUFA1 link to infopage 0.793604 5.841105e-24 1.012088e-19 1.012088e-20
11 7905571 8002133 NM_002801 PSMB10 link to infopage 0.791193 9.942022e-24 1.722654e-19 1.566049e-20
12 7905571 8018305 NM_016185 HN1 link to infopage 0.787701 2.121247e-23 3.675485e-19 3.062904e-20
13 7905571 8072744 NM_013416 NCF4 link to infopage 0.783852 4.811889e-23 8.337560e-19 6.413507e-20
14 7905571 8134589 NM_003910 BUD31 link to infopage 0.783335 5.364681e-23 9.295384e-19 6.639560e-20
15 7905571 8160587 NM_002493 NDUFB6 link to infopage 0.769256 9.289752e-22 1.609635e-17 1.073090e-18
16 7905571 8036808 NM_018457 PRR13 link to infopage 0.764435 2.355642e-21 4.081621e-17 2.551013e-18
17 7905571 8134740 NM_001008395 C7orf59 link to infopage 0.763945 2.586151e-21 4.481023e-17 2.635896e-18
18 7905571 7920258 NM_014624 S100A6 link to infopage 0.760474 4.977393e-21 8.624329e-17 4.791294e-18
19 7905571 7956211 NM_021019 MYL6 link to infopage 0.757856 8.097106e-21 1.402985e-16 7.384134e-18
20 7905571 7930304 NM_004832 GSTO1 link to infopage 0.757163 9.199255e-21 1.593955e-16 7.969775e-18
21 7905571 7955810 NM_018457 PRR13 link to infopage 0.755568 1.232609e-20 2.135741e-16 1.017019e-17
22 7905571 8082058 NM_005213 CSTA link to infopage 0.753055 1.945128e-20 3.370323e-16 1.531965e-17
23 7905571 7920244 NM_002964 S100A8 link to infopage 0.750063 3.324387e-20 5.760165e-16 2.504420e-17
24 7905571 7983512 NM_021199 SQRDL link to infopage 0.749634 3.588325e-20 6.217490e-16 2.590621e-17
25 7905571 8010050 NM_182565 FAM100B link to infopage 0.749289 3.814768e-20 6.609849e-16 2.643940e-17
26 7905571 8041508 NM_012413 QPCT link to infopage 0.748801 4.158733e-20 7.205837e-16 2.771476e-17
27 7905571 8030374 NM_004107 FCGRT link to infopage 0.746327 6.425656e-20 1.113373e-15 4.123605e-17
28 7905571 8046515 NM_002107 H3F3A link to infopage 0.743764 1.003016e-19 1.737926e-15 6.206880e-17
29 7905571 8122327 NM_015439 CCDC28A link to infopage 0.743741 1.007129e-19 1.745053e-15 6.017423e-17
30 7905571 8038792 NM_001985 ETFB link to infopage 0.742544 1.237752e-19 2.144652e-15 7.148841e-17
31 7905571 7983360 NM_004048 B2M link to infopage 0.742503 1.246408e-19 2.159652e-15 6.966619e-17
32 7905571 8050695 NM_016047 SF3B14 link to infopage 0.742436 1.260908e-19 2.184775e-15 6.827422e-17
33 7905571 7994756 NM_002720 PPP4C link to infopage 0.740677 1.703390e-19 2.951464e-15 8.943831e-17
34 7905571 8124828 NM_005803 FLOT1 link to infopage 0.740165 1.858477e-19 3.220182e-15 9.471125e-17
35 7905571 8178419 NM_005803 FLOT1 link to infopage 0.740165 1.858477e-19 3.220182e-15 9.200521e-17
36 7905571 8179688 NM_005803 FLOT1 link to infopage 0.740165 1.858477e-19 3.220182e-15 8.944951e-17
37 7905571 8102860 NM_002107 H3F3A link to infopage 0.736485 3.454617e-19 5.985816e-15 1.617788e-16
38 7905571 8062326 NR_026562 C20orf24 link to infopage 0.734189 5.059950e-19 8.767376e-15 2.307204e-16
39 7905571 7937465 NM_006755 TALDO1 link to infopage 0.733618 5.560835e-19 9.635259e-15 2.470579e-16
40 7905571 8018364 NM_002086 GRB2 link to infopage 0.733152 6.004596e-19 1.040416e-14 2.601041e-16
41 7905571 7910124 NM_002107 H3F3A link to infopage 0.731408 7.992354e-19 1.384835e-14 3.377647e-16
42 7905571 8065433 NM_020531 C20orf3 link to infopage 0.727166 1.587346e-18 2.750395e-14 6.548560e-16
43 7905571 8093462 NM_001017405 MAEA link to infopage 0.726852 1.669402e-18 2.892573e-14 6.726913e-16
44 7905571 7951372 NM_033306 CASP4 link to infopage 0.725108 2.204288e-18 3.819369e-14 8.680384e-16
45 7905571 8001782 NM_002954 RPS27A link to infopage 0.725054 2.223245e-18 3.852217e-14 8.560482e-16
46 7905571 7973660 NM_016576 GMPR2 link to infopage 0.724748 2.334072e-18 4.044247e-14 8.791842e-16
47 7905571 8042052 NM_002954 RPS27A link to infopage 0.719397 5.399844e-18 9.356310e-14 1.990704e-15
48 7905571 7990810 NM_006441 MTHFS link to infopage 0.719265 5.511354e-18 9.549523e-14 1.989484e-15
49 7905571 8067382 NM_002792 PSMA7 link to infopage 0.718945 5.790382e-18 1.003299e-13 2.047550e-15
50 7905571 8031207 NM_001130917 LILRA2 link to infopage 0.718921 5.812103e-18 1.007063e-13 2.014126e-15

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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