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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id Label1 AccNum GeneSym Info Gene Name
14406 8139712 NM_030796 VOPP1 link to infopage vesicular, overexpressed in cancer, prosurvival protein 1
14425 7904969 NM_030796 VOPP1 link to infopage vesicular, overexpressed in cancer, prosurvival protein 1

Fetching correlation data, please wait...
Getting list of correlations for id 14406.
Getting list of p-values for id 14406.
1 of 2 done.
Getting list of correlations for id 14425.
Getting list of p-values for id 14425.
2 of 2 done.
Calculating corrections for multiple testing (n=34654), please wait...
Done; whole program took 0.268 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7904969 8139712 NM_030796 VOPP1 link to infopage 0.977139 4.398914e-71 1.524400e-66 1.524400e-66
2 8139712 7904969 NM_030796 VOPP1 link to infopage 0.977139 4.398914e-71 1.524400e-66 7.621998e-67
3 8139712 7937802 NM_004356 CD81 link to infopage 0.744659 8.591090e-20 2.977156e-15 9.923854e-16
4 7904969 7937802 NM_004356 CD81 link to infopage 0.742170 1.319845e-19 4.573790e-15 1.143448e-15
5 7904969 8110803 NM_030782 CLPTM1L link to infopage 0.738928 2.291525e-19 7.941049e-15 1.588210e-15
6 7904969 7904974 NR_003242 C1orf152 link to infopage 0.736293 3.567509e-19 1.236284e-14 2.060474e-15
7 7904969 8132592 NM_002541 OGDH link to infopage 0.733770 5.423223e-19 1.879364e-14 2.684805e-15
8 7904969 8077804 NM_014760 TATDN2 link to infopage 0.722948 3.101623e-18 1.074836e-13 1.343545e-14
9 7904969 8132819 NM_006060 IKZF1 link to infopage 0.721592 3.836507e-18 1.329503e-13 1.477226e-14
10 8139712 8110803 NM_030782 CLPTM1L link to infopage 0.719816 5.060170e-18 1.753551e-13 1.753551e-14
11 7904969 7952557 NM_003139 SRPR link to infopage 0.717449 7.292548e-18 2.527160e-13 2.297418e-14
12 8139712 7904974 NR_003242 C1orf152 link to infopage 0.716864 7.977018e-18 2.764356e-13 2.303630e-14
13 7904969 8026106 NM_004343 CALR link to infopage 0.714907 1.075266e-17 3.726228e-13 2.866329e-14
14 7904969 8013696 NM_014680 KIAA0100 link to infopage 0.713897 1.253334e-17 4.343303e-13 3.102359e-14
15 7904969 8011759 NM_005022 PFN1 link to infopage 0.711960 1.678098e-17 5.815282e-13 3.876855e-14
16 7904969 7972946 NM_007368 RASA3 link to infopage 0.711650 1.757908e-17 6.091855e-13 3.807410e-14
17 7904969 8164644 NM_033387 FAM78A link to infopage 0.708668 2.740800e-17 9.497968e-13 5.587040e-14
18 7904969 8075924 NM_002405 MFNG link to infopage 0.708544 2.791459e-17 9.673523e-13 5.374180e-14
19 8139712 8053890 NM_020151 STARD7 link to infopage 0.708093 2.983812e-17 1.034010e-12 5.442160e-14
20 7904969 8011516 NM_174954 ATP2A3 link to infopage 0.706758 3.631878e-17 1.258591e-12 6.292955e-14
21 7904969 8053890 NM_020151 STARD7 link to infopage 0.705809 4.173540e-17 1.446299e-12 6.887136e-14
22 8139712 8077804 NM_014760 TATDN2 link to infopage 0.704237 5.248808e-17 1.818922e-12 8.267827e-14
23 7904969 8029029 NM_007040 HNRNPUL1 link to infopage 0.702490 6.758916e-17 2.342235e-12 1.018363e-13
24 7904969 7935968 NM_003893 LDB1 link to infopage 0.702330 6.916290e-17 2.396771e-12 9.986547e-14
25 7904969 8068974 NM_003274 TRAPPC10 link to infopage 0.701614 7.667436e-17 2.657073e-12 1.062829e-13
26 7904969 7956166 NM_015292 ESYT1 link to infopage 0.698882 1.132915e-16 3.926005e-12 1.510002e-13
27 7904969 8027621 NM_000175 GPI link to infopage 0.698288 1.232443e-16 4.270908e-12 1.581818e-13
28 8139712 8026106 NM_004343 CALR link to infopage 0.697428 1.392037e-16 4.823965e-12 1.722845e-13
29 7904969 7928369 NM_004922 SEC24C link to infopage 0.697244 1.428602e-16 4.950678e-12 1.707130e-13
30 7904969 8019250 NM_000918 P4HB link to infopage 0.696601 1.564239e-16 5.420712e-12 1.806904e-13
31 7904969 7949264 NM_006795 EHD1 link to infopage 0.696378 1.613979e-16 5.593083e-12 1.804220e-13
32 7904969 7948744 NM_198335 GANAB link to infopage 0.696215 1.651415e-16 5.722813e-12 1.788379e-13
33 7904969 7963614 NM_000889 ITGB7 link to infopage 0.695879 1.731264e-16 5.999524e-12 1.818038e-13
34 7904969 8139433 NM_033054 MYO1G link to infopage 0.695000 1.958017e-16 6.785313e-12 1.995680e-13
35 7904969 7920515 NM_017582 UBE2Q1 link to infopage 0.694742 2.030116e-16 7.035166e-12 2.010047e-13
36 8139712 8132819 NM_006060 IKZF1 link to infopage 0.694043 2.238111e-16 7.755951e-12 2.154431e-13
37 7904969 8032137 NM_001033026 C19orf6 link to infopage 0.693188 2.520456e-16 8.734389e-12 2.360646e-13
38 8139712 7928369 NM_004922 SEC24C link to infopage 0.692519 2.765629e-16 9.584012e-12 2.522108e-13
39 7904969 8052925 NM_144582 TEX261 link to infopage 0.692159 2.906660e-16 1.007274e-11 2.582754e-13
40 8139712 8011759 NM_005022 PFN1 link to infopage 0.691489 3.188614e-16 1.104982e-11 2.762456e-13
41 8139712 8013696 NM_014680 KIAA0100 link to infopage 0.691380 3.236818e-16 1.121687e-11 2.735821e-13
42 7904969 8015655 NM_178126 FAM134C link to infopage 0.691373 3.239745e-16 1.122701e-11 2.673098e-13
43 7904969 7990511 NM_002833 PTPN9 link to infopage 0.689291 4.311551e-16 1.494125e-11 3.474709e-13
44 8139712 8164644 NM_033387 FAM78A link to infopage 0.688652 4.704213e-16 1.630198e-11 3.704995e-13
45 7904969 7925851 NM_014023 WDR37 link to infopage 0.687712 5.346205e-16 1.852674e-11 4.117053e-13
46 8139712 7972946 NM_007368 RASA3 link to infopage 0.687664 5.381093e-16 1.864764e-11 4.053835e-13
47 7904969 7928705 NM_030927 TSPAN14 link to infopage 0.687106 5.803832e-16 2.011260e-11 4.279277e-13
48 8139712 8132592 NM_002541 OGDH link to infopage 0.686257 6.510250e-16 2.256062e-11 4.700129e-13
49 8139712 8075924 NM_002405 MFNG link to infopage 0.686225 6.538517e-16 2.265858e-11 4.624199e-13
50 8139712 7949264 NM_006795 EHD1 link to infopage 0.685998 6.741623e-16 2.336242e-11 4.672484e-13

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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