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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
11733 8146142 NM_178819 AGPAT6 link to infopage 1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)

Fetching correlation data, please wait...
Getting list of correlations for id 11733.
Getting list of p-values for id 11733.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.498 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8146142 7978208 NM_012461 TINF2 link to infopage 0.797306 2.545939e-24 4.411349e-20 4.411349e-20
2 8146142 8116020 NM_006816 LMAN2 link to infopage 0.794827 4.447993e-24 7.707038e-20 3.853519e-20
3 8146142 7921752 NM_001025598 ARHGAP30 link to infopage 0.787426 2.250721e-23 3.899824e-19 1.299941e-19
4 8146142 7956443 NM_004990 MARS link to infopage 0.786760 2.595650e-23 4.497482e-19 1.124371e-19
5 8146142 7955908 NM_005337 NCKAP1L link to infopage 0.783288 5.417926e-23 9.387640e-19 1.877528e-19
6 8146142 8013696 NM_014680 KIAA0100 link to infopage 0.782727 6.094631e-23 1.056017e-18 1.760028e-19
7 8146142 8077550 NM_001077525 MTMR14 link to infopage 0.779993 1.075962e-22 1.864319e-18 2.663313e-19
8 8146142 7947894 NM_198700 CELF1 link to infopage 0.779012 1.316588e-22 2.281252e-18 2.851565e-19
9 8146142 8016099 NM_004247 EFTUD2 link to infopage 0.776306 2.286005e-22 3.960961e-18 4.401068e-19
10 8146142 8138773 NM_022170 EIF4H link to infopage 0.775667 2.601607e-22 4.507805e-18 4.507805e-19
11 8146142 7916590 NM_001625 AK2 link to infopage 0.773970 3.658301e-22 6.338738e-18 5.762489e-19
12 8146142 7912198 NM_001428 ENO1 link to infopage 0.773528 3.996110e-22 6.924059e-18 5.770049e-19
13 8146142 7993371 NM_001004067 NOMO3 link to infopage 0.771369 6.134346e-22 1.062898e-17 8.176139e-19
14 8146142 7993511 NM_001004067 NOMO3 link to infopage 0.771369 6.134346e-22 1.062898e-17 7.592129e-19
15 8146142 7999791 NM_001004067 NOMO3 link to infopage 0.771369 6.134346e-22 1.062898e-17 7.085987e-19
16 8146142 8009227 NM_002805 PSMC5 link to infopage 0.769125 9.530097e-22 1.651280e-17 1.032050e-18
17 8146142 8133434 NM_022170 EIF4H link to infopage 0.768302 1.118875e-21 1.938675e-17 1.140397e-18
18 8146142 8146171 NM_001556 IKBKB link to infopage 0.767175 1.391975e-21 2.411874e-17 1.339930e-18
19 8146142 7941709 NM_002896 RBM4 link to infopage 0.766972 1.447753e-21 2.508521e-17 1.320274e-18
20 8146142 8125825 NM_006703 NUDT3 link to infopage 0.765520 1.914510e-21 3.317272e-17 1.658636e-18
21 8146142 7940051 NM_015457 ZDHHC5 link to infopage 0.760793 4.689249e-21 8.125061e-17 3.869077e-18
22 8146142 7900833 NM_014663 KDM4A link to infopage 0.758183 7.621315e-21 1.320545e-16 6.002479e-18
23 8146142 8160914 NM_007126 VCP link to infopage 0.754558 1.481379e-20 2.566785e-16 1.115993e-17
24 8146142 7976876 NM_001376 DYNC1H1 link to infopage 0.754270 1.560960e-20 2.704676e-16 1.126948e-17
25 8146142 8164883 NM_033161 SURF4 link to infopage 0.753567 1.773041e-20 3.072149e-16 1.228860e-17
26 8146142 8093685 NM_002111 HTT link to infopage 0.752051 2.330270e-20 4.037659e-16 1.552946e-17
27 8146142 8134699 NM_006833 COPS6 link to infopage 0.750288 3.194253e-20 5.534683e-16 2.049882e-17
28 8146142 8024936 NM_002967 SAFB link to infopage 0.750283 3.196723e-20 5.538962e-16 1.978201e-17
29 8146142 8053890 NM_020151 STARD7 link to infopage 0.750207 3.240781e-20 5.615301e-16 1.936311e-17
30 8146142 7899737 NM_003757 EIF3I link to infopage 0.750143 3.277928e-20 5.679666e-16 1.893222e-17
31 8146142 8132580 NM_006555 YKT6 link to infopage 0.749446 3.710123e-20 6.428529e-16 2.073719e-17
32 8146142 8099340 NM_017491 WDR1 link to infopage 0.749395 3.743220e-20 6.485877e-16 2.026836e-17
33 8146142 7995069 NM_004960 FUS link to infopage 0.748439 4.433235e-20 7.681466e-16 2.327717e-17
34 8146142 7967841 NM_001161344 CHFR link to infopage 0.746850 5.863199e-20 1.015916e-15 2.987990e-17
35 8146142 7920492 NM_001098616 C1orf43 link to infopage 0.745952 6.860439e-20 1.188708e-15 3.396309e-17
36 8146142 8006690 NM_012138 AATF link to infopage 0.745672 7.203417e-20 1.248136e-15 3.467045e-17
37 8146142 8073192 NM_006003 UQCRFS1 link to infopage 0.744151 9.381948e-20 1.625610e-15 4.393541e-17
38 8146142 7955721 NM_001004304 ZNF740 link to infopage 0.744078 9.501002e-20 1.646239e-15 4.332207e-17
39 8146142 7925851 NM_014023 WDR37 link to infopage 0.743753 1.005025e-19 1.741407e-15 4.465147e-17
40 8146142 7998033 NM_014972 TCF25 link to infopage 0.743600 1.031843e-19 1.787874e-15 4.469685e-17
41 8146142 7990211 NM_000520 HEXA link to infopage 0.743256 1.094955e-19 1.897229e-15 4.627388e-17
42 8146142 7928369 NM_004922 SEC24C link to infopage 0.743003 1.143661e-19 1.981622e-15 4.718147e-17
43 8146142 8064522 NM_174856 IDH3B link to infopage 0.742158 1.322384e-19 2.291295e-15 5.328593e-17
44 8146142 7960594 NM_001273 CHD4 link to infopage 0.740783 1.672808e-19 2.898474e-15 6.587442e-17
45 8146142 8024238 NM_001280 CIRBP link to infopage 0.740548 1.741082e-19 3.016773e-15 6.703939e-17
46 8146142 7948744 NM_198335 GANAB link to infopage 0.740391 1.788428e-19 3.098809e-15 6.736541e-17
47 8146142 8134552 NM_005720 ARPC1B link to infopage 0.739617 2.039594e-19 3.534005e-15 7.519160e-17
48 8146142 8114628 NM_002109 HARS link to infopage 0.738773 2.352368e-19 4.075948e-15 8.491558e-17
49 8146142 7959282 NM_194271 RNF34 link to infopage 0.738728 2.370448e-19 4.107276e-15 8.382196e-17
50 8146142 7940688 NM_002696 POLR2G link to infopage 0.738055 2.655290e-19 4.600821e-15 9.201643e-17

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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