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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 8533.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
8533 8114618 NM_002488 NDUFA2 link to infopage NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa

Fetching correlation data, please wait...
Getting list of correlations for id 8533.
Getting list of p-values for id 8533.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.117 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8114618 7897404 NM_007262 PARK7 link to infopage 0.792012 8.304538e-24 1.438927e-19 1.438927e-19
2 8114618 8169659 NM_004541 NDUFA1 link to infopage 0.781552 7.788988e-23 1.349598e-18 6.747990e-19
3 8114618 8089249 NM_000986 RPL24 link to infopage 0.775103 2.914612e-22 5.050148e-18 1.683383e-18
4 8114618 7920271 NM_019554 S100A4 link to infopage 0.771308 6.208807e-22 1.075800e-17 2.689500e-18
5 8114618 7978833 NM_001001 RPL36AL link to infopage 0.748747 4.198501e-20 7.274743e-16 1.454949e-16
6 8114618 8139706 NM_014302 SEC61G link to infopage 0.743607 1.030625e-19 1.785764e-15 2.976273e-16
7 8114618 8122705 NM_005389 PCMT1 link to infopage 0.741722 1.424965e-19 2.469038e-15 3.527196e-16
8 8114618 8126450 NM_000986 RPL24 link to infopage 0.739522 2.072373e-19 3.590801e-15 4.488502e-16
9 8114618 8134552 NM_005720 ARPC1B link to infopage 0.739511 2.076503e-19 3.597957e-15 3.997729e-16
10 8114618 7906662 NM_016406 UFC1 link to infopage 0.730483 9.292213e-19 1.610062e-14 1.610062e-15
11 8114618 7944216 NM_006476 ATP5L link to infopage 0.729199 1.144357e-18 1.982828e-14 1.802571e-15
12 8114618 7956211 NM_021019 MYL6 link to infopage 0.728891 1.202834e-18 2.084150e-14 1.736792e-15
13 8114618 7955768 NM_002624 PFDN5 link to infopage 0.726601 1.737759e-18 3.011015e-14 2.316166e-15
14 8114618 8064502 NM_003091 SNRPB link to infopage 0.722695 3.227242e-18 5.591842e-14 3.994173e-15
15 8114618 8109750 NM_001002 RPLP0 link to infopage 0.722508 3.323460e-18 5.758559e-14 3.839040e-15
16 8114618 8139411 NM_182547 TMED4 link to infopage 0.722391 3.385173e-18 5.865489e-14 3.665931e-15
17 8114618 8010768 link to infopage -0.722133 3.525095e-18 6.107932e-14 3.592901e-15
18 8114618 8043197 NM_003761 VAMP8 link to infopage 0.719425 5.376136e-18 9.315231e-14 5.175128e-15
19 8114618 7920492 NM_001098616 C1orf43 link to infopage 0.718990 5.750196e-18 9.963364e-14 5.243876e-15
20 8114618 7978201 NM_006156 NEDD8 link to infopage 0.718469 6.232158e-18 1.079846e-13 5.399230e-15
21 8114618 8116020 NM_006816 LMAN2 link to infopage 0.717458 7.282038e-18 1.261759e-13 6.008375e-15
22 8114618 8043100 NM_021103 TMSB10 link to infopage 0.716185 8.850138e-18 1.533463e-13 6.970288e-15
23 8114618 7928752 NM_014394 GHITM link to infopage 0.715251 1.020465e-17 1.768160e-13 7.687654e-15
24 8114618 7905507 NM_178428 LCE2A link to infopage -0.714833 1.087456e-17 1.884235e-13 7.850978e-15
25 8114618 7940688 NM_002696 POLR2G link to infopage 0.714095 1.216310e-17 2.107501e-13 8.430005e-15
26 8114618 7965480 NM_002629 PGAM1 link to infopage 0.714055 1.223649e-17 2.120217e-13 8.154680e-15
27 8114618 8039939 NM_017971 MRPL20 link to infopage 0.712122 1.637784e-17 2.837789e-13 1.051033e-14
28 8114618 7911559 NM_017971 MRPL20 link to infopage 0.712122 1.637784e-17 2.837789e-13 1.013496e-14
29 8114618 7915733 NM_002574 PRDX1 link to infopage 0.711571 1.778809e-17 3.082142e-13 1.062808e-14
30 8114618 8148270 NM_005005 NDUFB9 link to infopage 0.709202 2.532212e-17 4.387564e-13 1.462521e-14
31 8114618 8049137 NM_001631 ALPI link to infopage -0.707763 3.132622e-17 5.427894e-13 1.750934e-14
32 8114618 8028514 NM_013234 EIF3K link to infopage 0.706607 3.713287e-17 6.434013e-13 2.010629e-14
33 8114618 8015712 NM_001040431 CCDC56 link to infopage 0.705803 4.177483e-17 7.238324e-13 2.193432e-14
34 8114618 7968297 NM_015932 POMP link to infopage 0.705729 4.222662e-17 7.316606e-13 2.151943e-14
35 8114618 7958152 NM_002629 PGAM1 link to infopage 0.705061 4.655517e-17 8.066615e-13 2.304747e-14
36 8114618 7953021 NM_024551 ADIPOR2 link to infopage 0.704469 5.074467e-17 8.792530e-13 2.442369e-14
37 8114618 7929624 NM_002629 PGAM1 link to infopage 0.702514 6.735255e-17 1.167018e-12 3.154102e-14
38 8114618 8130952 NM_002793 PSMB1 link to infopage 0.702460 6.787580e-17 1.176084e-12 3.094958e-14
39 8114618 8140828 NM_003130 SRI link to infopage 0.701953 7.302113e-17 1.265237e-12 3.244198e-14
40 8114618 8122136 NM_001016 RPS12 link to infopage 0.701526 7.765080e-17 1.345455e-12 3.363639e-14
41 8114618 8089230 GENSCAN00000044426 link to infopage 0.700496 9.000689e-17 1.559549e-12 3.803779e-14
42 8114618 8000323 NM_005003 NDUFAB1 link to infopage 0.699920 9.772318e-17 1.693250e-12 4.031547e-14
43 8114618 7959153 NM_004373 COX6A1 link to infopage 0.699585 1.024978e-16 1.775979e-12 4.130183e-14
44 8114618 7959597 NM_006815 TMED2 link to infopage 0.698415 1.210509e-16 2.097449e-12 4.766929e-14
45 8114618 7964466 NM_006400 DCTN2 link to infopage 0.697683 1.342662e-16 2.326431e-12 5.169846e-14
46 8114618 8088526 NM_025075 THOC7 link to infopage 0.697682 1.342909e-16 2.326858e-12 5.058386e-14
47 8114618 8115849 link to infopage -0.697671 1.344920e-16 2.330342e-12 4.958175e-14
48 8114618 7912928 NM_003000 SDHB link to infopage 0.697566 1.365181e-16 2.365449e-12 4.928019e-14
49 8114618 8001782 NM_002954 RPS27A link to infopage 0.695023 1.951924e-16 3.382099e-12 6.902242e-14
50 8114618 8142878 NM_139286 CDC26 link to infopage 0.694744 2.029487e-16 3.516492e-12 7.032984e-14

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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