[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
4361 8160587 NM_002493 NDUFB6 link to infopage NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa

Fetching correlation data, please wait...
Getting list of correlations for id 4361.
Getting list of p-values for id 4361.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.136 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8160587 8101945 NM_002106 H2AFZ link to infopage 0.813097 6.013213e-26 1.041909e-21 1.041909e-21
2 8160587 8018305 NM_016185 HN1 link to infopage 0.802654 7.436796e-25 1.288574e-20 6.442868e-21
3 8160587 8169659 NM_004541 NDUFA1 link to infopage 0.799750 1.457588e-24 2.525562e-20 8.418540e-21
4 8160587 7978201 NM_006156 NEDD8 link to infopage 0.794397 4.896683e-24 8.484483e-20 2.121121e-20
5 8160587 7977657 NM_031314 HNRNPC link to infopage 0.790135 1.252612e-23 2.170400e-19 4.340800e-20
6 8160587 8036710 NM_004877 GMFG link to infopage 0.788596 1.749074e-23 3.030621e-19 5.051035e-20
7 8160587 7976189 NM_002802 PSMC1 link to infopage 0.787646 2.146794e-23 3.719749e-19 5.313928e-20
8 8160587 8080923 NM_002802 PSMC1 link to infopage 0.785248 3.582400e-23 6.207224e-19 7.759030e-20
9 8160587 8048703 NM_032338 LLPH link to infopage 0.784732 3.996003e-23 6.923874e-19 7.693194e-20
10 8160587 7916372 NM_004872 TMEM59 link to infopage 0.782136 6.896650e-23 1.194983e-18 1.194983e-19
11 8160587 7978833 NM_001001 RPL36AL link to infopage 0.777237 1.892515e-22 3.279160e-18 2.981055e-19
12 8160587 7917472 NM_001514 GTF2B link to infopage 0.774187 3.503240e-22 6.070064e-18 5.058386e-19
13 8160587 7932069 NM_014142 NUDT5 link to infopage 0.772440 4.962350e-22 8.598263e-18 6.614049e-19
14 8160587 7930304 NM_004832 GSTO1 link to infopage 0.769418 9.000283e-22 1.559479e-17 1.113914e-18
15 8160587 7905571 NM_002965 S100A9 link to infopage 0.769256 9.289752e-22 1.609635e-17 1.073090e-18
16 8160587 7963911 NM_001780 CD63 link to infopage 0.768470 1.082936e-21 1.876404e-17 1.172752e-18
17 8160587 8164067 NM_002799 PSMB7 link to infopage 0.768449 1.087211e-21 1.883811e-17 1.108124e-18
18 8160587 7938880 NM_001098520 HTATIP2 link to infopage 0.765794 1.816300e-21 3.147103e-17 1.748390e-18
19 8160587 7940688 NM_002696 POLR2G link to infopage 0.765361 1.973515e-21 3.419509e-17 1.799741e-18
20 8160587 8139706 NM_014302 SEC61G link to infopage 0.765284 2.002754e-21 3.470173e-17 1.735086e-18
21 8160587 7979473 NM_016029 DHRS7 link to infopage 0.762182 3.611425e-21 6.257515e-17 2.979769e-18
22 8160587 7897404 NM_007262 PARK7 link to infopage 0.760716 4.757397e-21 8.243142e-17 3.746883e-18
23 8160587 7913814 NM_015484 SYF2 link to infopage 0.760089 5.349132e-21 9.268441e-17 4.029757e-18
24 8160587 8047059 NM_031314 HNRNPC link to infopage 0.757216 9.111415e-21 1.578735e-16 6.578062e-18
25 8160587 7960553 NM_016497 MRPL51 link to infopage 0.757188 9.157910e-21 1.586791e-16 6.347164e-18
26 8160587 7971550 NM_014166 MED4 link to infopage 0.756476 1.043695e-20 1.808411e-16 6.955428e-18
27 8160587 8049180 NM_004846 EIF4E2 link to infopage 0.756450 1.048731e-20 1.817137e-16 6.730135e-18
28 8160587 7928752 NM_014394 GHITM link to infopage 0.753301 1.860436e-20 3.223578e-16 1.151278e-17
29 8160587 7968297 NM_015932 POMP link to infopage 0.752224 2.259201e-20 3.914518e-16 1.349834e-17
30 8160587 8122705 NM_005389 PCMT1 link to infopage 0.751721 2.472639e-20 4.284341e-16 1.428114e-17
31 8160587 8066402 NM_016470 C20orf111 link to infopage 0.751186 2.721000e-20 4.714677e-16 1.520864e-17
32 8160587 8168852 NM_019597 HNRNPH2 link to infopage 0.750849 2.890244e-20 5.007925e-16 1.564977e-17
33 8160587 7983512 NM_021199 SQRDL link to infopage 0.750550 3.048265e-20 5.281729e-16 1.600524e-17
34 8160587 7978174 NM_014169 CHMP4A link to infopage 0.750186 3.252501e-20 5.635609e-16 1.657532e-17
35 8160587 7975645 NM_021188 ZNF410 link to infopage 0.749752 3.513442e-20 6.087742e-16 1.739355e-17
36 8160587 8122327 NM_015439 CCDC28A link to infopage 0.748830 4.137309e-20 7.168715e-16 1.991310e-17
37 8160587 8039796 NM_014453 CHMP2A link to infopage 0.748514 4.375567e-20 7.581545e-16 2.049066e-17
38 8160587 7953723 NM_016184 CLEC4A link to infopage 0.747755 5.001920e-20 8.666827e-16 2.280744e-17
39 8160587 7920271 NM_019554 S100A4 link to infopage 0.746095 6.690933e-20 1.159338e-15 2.972661e-17
40 8160587 8139421 NM_012412 H2AFV link to infopage 0.746024 6.774477e-20 1.173814e-15 2.934534e-17
41 8160587 8163185 NM_003329 TXN link to infopage 0.745440 7.500704e-20 1.299647e-15 3.169871e-17
42 8160587 8000323 NM_005003 NDUFAB1 link to infopage 0.744283 9.169816e-20 1.588854e-15 3.782986e-17
43 8160587 7974603 NM_002788 PSMA3 link to infopage 0.744113 9.442765e-20 1.636148e-15 3.804995e-17
44 8160587 8130765 BC112329 FAM103A1 link to infopage 0.743818 9.937590e-20 1.721886e-15 3.913378e-17
45 8160587 8179827 NM_001288 CLIC1 link to infopage 0.743380 1.071889e-19 1.857262e-15 4.127249e-17
46 8160587 8028514 NM_013234 EIF3K link to infopage 0.743182 1.108954e-19 1.921484e-15 4.177139e-17
47 8160587 8142878 NM_139286 CDC26 link to infopage 0.742420 1.264255e-19 2.190575e-15 4.660799e-17
48 8160587 8048234 NM_152862 ARPC2 link to infopage 0.742342 1.281455e-19 2.220378e-15 4.625787e-17
49 8160587 7950644 NM_004549 NDUFC2 link to infopage 0.742123 1.330353e-19 2.305102e-15 4.704290e-17
50 8160587 8067382 NM_002792 PSMA7 link to infopage 0.741782 1.410531e-19 2.444027e-15 4.888055e-17

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!